Core-to-Core insights

Dr. Niels Vandamme with VIB Single Cell Core Project Manager Ria Roelandt at the Hamilton Vantage platform, where the core has fully automated its 10x Genomics workflows for consistent and scalable single cell processing.

How the VIB Single Cell Core uses Flex Gene Expression to make every experiment feasible

Niels Vandamme, PhD, Head of the VIB Single Cell Core Facility shares how the Flex Gene Expression assay provides operational flexibility and scalability at reasonable costs, making it possible to obtain high-quality data from fragile samples. Plus, explore their unique hack to reduce experimental costs even more. Read more.

How Dr. Katy Tudor & Dr. Minal Patel helped develop the Spatial Genomics Platform at the Wellcome Sanger Institute

This blog highlights how researchers built a dedicated spatial transcriptomics team at the Wellcome Sanger Institute. Learn how they’re leveraging their expertise to increase throughput and reduce costs, as well as how 10x Genomics has helped make it easy to incorporate spatial transcriptomics into their work. Read more.

Your sample prep corner

Check out our latest demonstrated workflows and protocols.

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Your data & discovery center

Build your single cell experiment now

More than a store: Streamline your entire research process with our store, where you can instantly get pricing, plan experiments, and access critical grant resources. Start now!

The nexus of spatial biology

Help your end users to choose the right platform. 

Discover our complementary Visium and Xenium spatial platforms.

Have you already started with Xenium protein?

Staining of the Protein Tumor Subpanel and Cellular Localization panels across several human FFPE tissue types. Only some markers from the Protein Tumor Subpanel and Cellular Localization panels are shown.

Read this technical note to familiarize yourself with the workflow.

Are you up to date with Xenium Analyzer?

Xenium Analysis Software v4.1, has been released, introducing Pathology Annotation. Import annotation directly and compare tissue structures to the molecular readout.

Key Visium questions being answered

• Visium HD Spatial Applications Performance Technical Note
• Nuclei Segmentation and Custom Binning of Visium HD Gene Expression Data
• Compatibility: Are plant samples compatible with the Visium HD 3’ assay?

Your bioinformatics corner

The CLI is a command-line based method (version 4.0.0) of interacting with the 10x Cloud. You can now analyze Universal 3’ & 5’ Gene Expression, Epi Multiome ATAC + Gene Expression, and Spatial Gene Expression data via the command line on the 10x Cloud. This will benefit if you have to analyze large volumes of data on a regular basis. Uploading FASTQ files and running the pipeline is now a one-step process via the CLI; and you can analyze multiple datasets in a batch using bash scripts. For more detailed information: CLI documentation.

Enhance your 10x expertise: Webinars

• Registrations are open: November 27, 3 PM CET | 2 PM BST, From archive to insight: The high-throughput revolution for FFPE and fixed clinical samples
• Save the date: December 11, 2 PM CET | 1 PM BST, Educational plate-based GEM-X Flex v2 webinar
• [on-demand] Educational Xenium webinar series
• Xenium Panel Design
• Xenium Workflow, including Xenium Protein
• Xenium Data Analysis
• [on-demand] Educational webinar Visium HD 3': Deeper spatial discovery

Voice of 10x technology users